sbol3.interaction

Module Contents

Classes

Interaction

The Interaction class provides more detailed description of how the

Functions

build_interaction(→ SBOLObject)

class Interaction(types: sbol3.typing.Union[str, list[str]], *, participations: sbol3.typing.List[Participation] = None, name: str = None, description: str = None, derived_from: sbol3.typing.List[str] = None, generated_by: sbol3.typing.List[str] = None, measures: sbol3.typing.List[SBOLObject] = None, identity: str = None, type_uri: str = SBOL_INTERACTION)

Bases: Identified

The Interaction class provides more detailed description of how the Feature objects of a Component are intended to work together. For example, this class can be used to represent different forms of genetic regulation (e.g., transcriptional activation or repression), processes from the central dogma of biology (e.g. transcription and translation), and other basic molecular interactions (e.g., non-covalent binding or enzymatic phosphorylation). Each Interaction includes type properties that refer to descriptive ontology terms and hasParticipation properties that describe which Feature objects participate in which ways in the Interaction.

accept(visitor: Any) → Any

Invokes visit_interaction on visitor with self as the only argument.

Parameters:

visitor (Any) – The visitor instance

Raises:

AttributeError – If visitor lacks a visit_interaction method

Returns:

Whatever visitor.visit_interaction returns

Return type:

Any

build_interaction(identity: str, *, type_uri: str = SBOL_INTERACTION) → SBOLObject