pySBOL3
stable
  • Introduction
  • Installation
  • Getting Started with pySBOL3
  • SBOL Extensions
  • Validation in pySBOL3
  • Using Visitors
  • Using Ontology Terms
  • API Reference
pySBOL3
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  • Welcome to pySBOL3’s documentation!
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Welcome to pySBOL3’s documentation!¶

pySBOL3 is a Python module for reading, writing, and constructing genetic designs according to the standardized specifications of the Synthetic Biology Open Language (SBOL).

  • Introduction
  • Installation
    • Install the current release
    • Install the latest from GitHub
    • For developers
    • Installing on macOS
    • Using PyPy
  • Getting Started with pySBOL3
    • Creating an SBOL Document
    • Creating SBOL Data Objects
    • Using Ontology Terms for Attribute Values
    • Adding, Finding, and Getting Objects from a Document
    • Getting, Setting, and Editing Attributes
    • Creating and Adding Child Objects
    • Creating and Editing Reference Properties
    • Iterating and Indexing List Properties
    • Copying Documents and Objects
  • SBOL Extensions
    • Defining Extension Properties
    • Extension Classes
  • Validation in pySBOL3
    • Validating Documents
    • Validating Objects
    • Extending Validation
  • Using Visitors
    • Resources
    • Example Code
    • Visit Methods
  • Using Ontology Terms
    • TYTO Installation
  • API Reference
    • sbol3

Indices and tables¶

  • Index

  • Module Index

  • Search Page

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